BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A04SP1|AL427238
(987 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1446 1771 0.0
>3x_Contig1446
Length = 10598
Score = 1771 bits (888), Expect = 0.0
Identities = 940/956 (98%), Gaps = 5/956 (0%)
Strand = Plus / Minus
Query: 1 gatccagttaanggctcaatcctgtaagaatactggtacactacaaatgaccttgaaaga 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4974 gatccagttaa-ggctcaatcctgtaagaatactggtacactacaaatgaccttgaaaga 4916
Query: 61 tgctgttctaacagacggtagcggtagattaggttccattgttgctaacagacaattcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4915 tgctgttctaacagacggtagcggtagattaggttccattgttgctaacagacaattcca 4856
Query: 121 attcgatggtccaccaccacaagctggtgccatctatgctaagggttgggctttgactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4855 attcgatggtccaccaccacaagctggtgccatctatgctaagggttgggctttgactcc 4796
Query: 181 agaaggtaacttggctctaggtgacagttatgtcttctaccaatgtctatcaggtgactt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4795 agaaggtaacttggctctaggtgacagtgatgtcttctaccaatgtctatcaggtgactt 4736
Query: 241 ctacaacttgtacgatgaaaacgtcgctgaacaatgtacaccagtctacttacaagctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4735 ctacaacttgtacgatgaaaacgtcgctgaacaatgtacaccagtctacttacaagctat 4676
Query: 301 cgatttggttgactgttaawatttcattaawatgacaaawtttcagttaattgagctgaa 360
||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||
Sbjct: 4675 cgatttggttgactgttaaaatttcattaaaatgacaaaatttcagttaattgagctgaa 4616
Query: 361 cagacatacgatttttttaatgaccctttcactttcatcttattctactctatttggcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4615 cagacatacgatttttttaatgaccctttcactttcatcttattctactctatttggcat 4556
Query: 421 gtacaaatctactactcagttatttcccgacacagagttgaattcctaacgcggtttacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4555 gtacaaatctactactcagttatttcccgacacagagttgaattcctaacgcggtttacg 4496
Query: 481 ttgttaccatgggttaggtaacatcaatggtatttttttwatcactatctaatttcttat 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4495 ttgttaccatgggttaggtaacatcaatggtatttttttaatcactatctaatttcttat 4436
Query: 541 gtttattattctctaagaacctgttcattatatgagttcatatgtctcatttcttcctgc 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4435 gtatattattctctaagaacctgttcattatatgagttcatatgtctcatttcttcctgc 4376
Query: 601 ttctgcttaawtcgctgcagaaagacgtgacggttccgacattttcgtcgtctccgcgat 660
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4375 ttctgcttaaatcgctgcagaaagacgtgacggttccgacattttcgtcgtctccgcgat 4316
Query: 661 gggttttaaaccagcgtcgtttggccttttgtcttgtcatacctggattgatacaagaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4315 gggttttaaaccagcgtcgtttggccttttgtcttgtcatacctggattgatacaagaag 4256
Query: 721 tacgatgatgttgggaaaagtactaaactgaatagggatattctgtaaaccaaggacttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4255 tacgatgatgttgggaaaagtactaaactgaatagggatattctgtaaaccaaggacttt 4196
Query: 781 ttaccgaagaactgaacgggcggcctctgtwatgtaacctaaaaatcccatcgtaacagt 840
||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4195 ttaccgaaggactg-acgggcggcctctgtaatgtaacctaaaaatcccatcgtaacagt 4137
Query: 841 taatgcagaaagatccctgtwagttaatgaatgchacactaggggaaatgtacttgcatt 900
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 4136 taatgcagaaagatccctgtaagttaatgaatgcaacactaggggaaatgtacttgcatt 4077
Query: 901 ttgtatttccgaa-gctctttggagctca-cttattagaagg-tggtcgatgattt 953
||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 4076 ttgtatttccgaaggctctttggagctcaccttattagaaggttggtcgatgattt 4021
Score = 417 bits (209), Expect = e-116
Identities = 257/273 (94%)
Strand = Plus / Plus
Query: 47 atgaccttgaaagatgctgttctaacagacggtagcggtagattaggttccattgttgct 106
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8817 atgactttgaaagacgctgttctaacagacggtagcggtagattaggttccattgttgct 8876
Query: 107 aacagacaattccaattcgatggtccaccaccacaagctggtgccatctatgctaagggt 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8877 aacagacaattccaattcgatggtccaccaccacaagctggtgccatctatgctaagggt 8936
Query: 167 tgggctttgactccagaaggtaacttggctctaggtgacagttatgtcttctaccaatgt 226
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 8937 tgggctttgactccagaaggtaacttggctctaggtgacagtgatgtcttctaccaatgt 8996
Query: 227 ctatcaggtgacttctacaacttgtacgatgaaaacgtcgctgaacaatgtacaccagtc 286
||||||||||| ||||||||||||||||||||| | | | ||| ||||||| |||||
Sbjct: 8997 ctatcaggtgaattctacaacttgtacgatgaatccattggtgaccaatgtagtgcagtc 9056
Query: 287 tacttacaagctatcgatttggttgactgttaa 319
|||| ||||| |||||||||||||||||||||
Sbjct: 9057 cacttgcaagccatcgatttggttgactgttaa 9089
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5712
Number of Sequences: 1807
Number of extensions: 5712
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 987
length of database: 10,358,551
effective HSP length: 16
effective length of query: 971
effective length of database: 10,329,639
effective search space: 10030079469
effective search space used: 10030079469
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)